Career
2015 – present time Center for Algorithmic Biotechnology, Junior Research Fellow
2014 – 2015 Algorithmic Biology Lab, Intern
Education
2015 – present time Saint-Petersburg State University, Physical Faculty (Candidate degree)
2013 – 2015 Saint-Petersburg State University, Physical Faculty, Department of Computational Physics (Masters degree)
2013 – 2014 Bioinformatics Institute, Algorithmic bioinformatics, Saint-Petersburg, Russia
2009 – 2013 Saint-Petersburg State University, Physical Faculty, Department of Computational Physics (Bachelor of Applied Mathematics and Physics)
2005 – 2009 State educational institution Lyceum № 533 (Junior Mathematical School)
Activities
August 2013 Summer Intel School, St. Petersburg, Russia
2009 Winter Yandex School “Combinatorial Mathematics and Algorithms”, Russia
July 2008 Summer Informatics School, Kostroma, Russia
July 2007 Summer Informatics School, Kostroma, Russia
2004 – 2007 Summer Mathematics Camp, Russia
Skills & Interests
Programming Java, C++, Python
Algorithms, NGS Data Analysis, Biotechnology, Comparative genomics, Transcriptomics
Numerical Methods, Methods of Computer Modeling, Computational Physics
Hobbies
Traveling, Snowboard, Volleyball, Art (Graduated Art School 2009)
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Elena Bushmanova, Dmitry Antipov, Alla Lapidus, Andrey D Prjibelski
rnaSPAdes: a de novo transcriptome assembler and its application to RNA-Seq data GigaScience,
2019
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Antipov D. , Bushmanova E. , Dvorkina T. , Gurevich A. , Kunyavskaya O. , Shlemov A., Lapidus A. , Meleshko D. , Nurk S. , Prjibelski A. , Korobeynikov A.
SPAdes Family of Tools for Genome Assembly and Analysis (poster),
2019
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Korobeynikov A. , Antipov D. , Bushmanova E. , Gurevich A. , Lapidus A. , Meleshko D. , Mikheenko A. , Nurk S. , Prjibelski A. , Pevzner P. A.
SPAdes Family of Tools for Genome Assembly and Analysis: What’s New? (poster),
2018
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Korobeynikov A. , Antipov D. , Bushmanova E. , Gurevich A. , Lapidus A. L. , Meleshko D. , Mikheenko A. , Nurk S. , Prjibelski A. , and Pevzner P. A.
SPAdes Family of Tools for Genome Assembly and Analysis: Current Status (poster),
2018
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Korobeynikov A. , Antipov D. , Bankevich A. , Bushmanova E. , Lapidus A. , Meleshko D. , Nurk S. , Prjibelski A. , Pevzner P. A.
SPAdes: is there anything new we could develop? (talk),
2017
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Lapidus A. , Antipov D. , Bankevich A. , Bushmanova E. , Korobeynikov A. , Meleshko D. , Nurk S. , Prjibelski A. , Pevzner P. A.
SPAdes Family of Tools for Genome Assembly and Analysis: What’s New? (poster),
2017
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Korobeynikov A. , Antipov D. , Bankevich A. , Bushmanova E. , Gurevich A. , Lapidus A. , Meleshko D. , Nurk S. , Prjibelski A. , Pevzner P. A.
SPAdes Family of Tools for Genome Assembly and Analysis: What’s New? (poster),
2017
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Bushmanova E., Antipov D., Lapidus A., Suvorov V., Prjibelski A.
rnaQUAST: a quality assessment tool for de novo transcriptome assemblies. Bioinformatics,
2016
