hpcSPAdes

SPAdes 3.15.0 (hpc) is released!

SPAdes could be run on cluster now! Also several pipeline speedups have been implemented

Download SPAdes source code

Manuals and support

If you have a problem running SPAdes you can look for a similar issue on our GitHub repository, create a new one or write us via e-mail: .

Publications

  1. Antipov D. , Bushmanova E. , Dvorkina T. , Gurevich A. , Kunyavskaya O. , Shlemov A., Lapidus A. , Meleshko D. , Nurk S. , Prjibelski A. , Korobeynikov A. SPAdes Family of Tools for Genome Assembly and Analysis (poster), 2019
  2. Korobeynikov A. Tools for assembly graph analysis via SPAdes toolbox and more (talk), 2019