Yana Safonova

Junior Research Fellow

Software

Publications

  1. Shlemov A., Bzikadze A., Bankevich S., Safonova Y. IgReC 2.0: New algorithmic challenges of adaptive immune repertoire construction. Proceedings of RECOMB­Seq, 2016
  2. Safonova Y., Shlemov A., Bzikadze A., Bankevich S., Pevzner P. A. A novel toolkit for analysis of adaptive immune repertoires using immunosequencing and mass spectra data. Poster., 2016
  3. Safonova Y. IgRepertoireConstructor: a novel algorithm for antibody repertoire construction and immunoproteogenomics analysis. Talk on ISMB/ECCB 2015. Dublin, Ireland., 2015
  4. Lapidus A., Antipov D., Bankevich A., Gurevich A., Korobeynikov A., Nurk S., Prjibelski A., Safonova Y., Vasilinetc I., Pevzner P. A. New Frontiers of Genome Assembly with SPAdes 3.0. (poster), 2014
  5. Safonova Y., Bankevich A., Pevzner P. A. dipSPAdes: assembler for highly polymorphic diploid genomes. In Sharan, Roded (eds.) RECOMB 2014, LNCS (8394). pp. 265-279. Springer, Heidelberg, 2014
  6. Safonova Y., Bankevich A., Pevzner P. A. dipSPAdes: assembler for highly polymorphic diploid genomes. Talk., 2014
  7. Safonova Y., Kondrashov A., Logacheva M., Penin A., Bankevich A. NGS assembly of highly polymorphic diploid genomes. , 2013